Splice variant |
Ensembl |
UniProt |
Protein class |
Gene ontology |
Length (aa) |
Molecular mass (kDa) |
Signal peptide (predicted) |
Transmembrane regions (predicted)
|
COL13A1-001 |
ENSP00000381949
ENST00000398978
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
717 |
69.9 |
No |
1 |
COL13A1-002 |
ENSP00000346553
ENST00000354547
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
695 |
67.4 |
No |
1 |
COL13A1-003 |
ENSP00000430089
ENST00000479733
|
E7EX21 Show all »
« Hide
E7EX21 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:16%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
582 |
57.7 |
No |
1 |
COL13A1-004 |
ENSP00000350463
ENST00000357811
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
683 |
66.4 |
No |
1 |
COL13A1-006 |
ENSP00000381947
ENST00000398975
|
|
Show »
« Hide
Protein evidence (Ezkurdia et al 2014)
|
|
247 |
23.2 |
No |
0 |
COL13A1-008 |
ENSP00000388774
ENST00000456019
|
|
Show »
« Hide
Protein evidence (Ezkurdia et al 2014)
|
|
174 |
16.4 |
No |
0 |
COL13A1-011 |
ENSP00000428057
ENST00000520267
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:15%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
645 |
63 |
No |
1 |
COL13A1-013 |
ENSP00000430061
ENST00000517713
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
668 |
65 |
No |
1 |
COL13A1-014 |
ENSP00000428342
ENST00000522165
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
686 |
66.9 |
No |
1 |
COL13A1-015 |
ENSP00000430173
ENST00000520133
|
Q5TAT6 Show all »
« Hide
Q5TAT6 [Direct mapping]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:16%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
Show »
« Hide
|
610 |
59.5 |
No |
1 |
COL13A1-201 |
ENSP00000348695
ENST00000356340
|
G5E987 Show all »
« Hide
G5E987 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain; Collagen, type XIII, alpha 1, isoform CRA_u Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
717 |
70 |
No |
1 |
COL13A1-202 |
ENSP00000381936
ENST00000398964
|
E7ES56 Show all »
« Hide
E7ES56 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
688 |
67.4 |
No |
1 |
COL13A1-203 |
ENSP00000381938
ENST00000398966
|
E7ES55 Show all »
« Hide
E7ES55 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
695 |
67.5 |
No |
1 |
COL13A1-204 |
ENSP00000381940
ENST00000398968
|
E7ES51 Show all »
« Hide
E7ES51 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
698 |
68 |
No |
1 |
COL13A1-205 |
ENSP00000381941
ENST00000398969
|
E7ES50 Show all »
« Hide
E7ES50 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:15%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
645 |
62.9 |
No |
1 |
COL13A1-206 |
ENSP00000381943
ENST00000398971
|
E7ES49 Show all »
« Hide
E7ES49 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins MEMSAT-SVM predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
702 |
68.6 |
No |
1 |
COL13A1-207 |
ENSP00000381944
ENST00000398972
|
E7ES47 Show all »
« Hide
E7ES47 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
703 |
68.6 |
No |
1 |
COL13A1-208 |
ENSP00000381945
ENST00000398973
|
E9PEG9 Show all »
« Hide
E9PEG9 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:14%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Membrane proteins predicted by MDM MEMSAT3 predicted membrane proteins Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins 1TM proteins predicted by MDM Predicted membrane proteins Prediction method-based # TM segments-based Protein evidence (Ezkurdia et al 2014)
|
|
691 |
67.5 |
No |
1 |
COL13A1-209 |
ENSP00000381946
ENST00000398974
|
E7ES46 Show all »
« Hide
E7ES46 [Target identity:100%; Query identity:100%]Collagen alpha-1(XIII) chain Q9UP45 [Target identity:13%; Query identity:100%]Type XIII collagen
|
Show »
« Hide
Phobius predicted membrane proteins SPOCTOPUS predicted membrane proteins THUMBUP predicted membrane proteins Protein evidence (Ezkurdia et al 2014)
|
|
705 |
68.9 |
No |
0 |